Calculate Homogeneity, Completeness, and V-Measure

Integrated from scCluBench (Xu et al., AAAI 2026).

Usage

calc_homogeneity_completeness_v_measure(pred, truth, beta = 1)

Arguments

pred

Vector of predicted cluster labels.

truth

Vector of ground truth cell type labels.

beta

Weight of completeness vs. homogeneity (default 1).

Value

A named list containing homogeneity, completeness, and v_measure.

Examples

pred <- factor(rep(c("A", "B"), each = 20))
truth <- factor(rep(c("A", "B"), each = 20))
calc_homogeneity_completeness_v_measure(pred, truth)
#> $homogeneity
#> [1] 1
#> 
#> $completeness
#> [1] 1
#> 
#> $v_measure
#> [1] 1
#>